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Journal Microbiome ecology
Discovery

Westlake Frequent-sampling Cohort 2

Hypothesis
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Editor's note
Distinguishing which microbiome changes matter clinically requires knowing what stability actually looks like in individuals over years—not weeks. This prospective follow-up directly addresses a foundational gap: whether the short-term variability patterns we observe persist or dampen, and where a true "core" microbiome ends and noise begins. Gastroenterologists, microbiome researchers, and FMT practitioners should track this study's longitudinal architecture, as it will calibrate how we interpret dysbiosis and engraftment trajectories in clinical populations.

Source: ctgov · Westlake University · RECRUITING · 2026-05-26

URL: https://clinicaltrials.gov/study/NCT07606885

AI rationale (4/5, tier: emerging): Longitudinal cohort tracking gut microbiome stability/dynamics over multiple timescales; matches INCLUDE priority for longitudinal human cohorts and colonisation dynamics.


This observational follow-up study extends a previously completed 15-day intensive longitudinal study (WeF) of the gut microbiome in healthy adults. The objective of WeF2 is to characterize the long-term stability and dynamics of the gut and oral microbiota in the same cohort across multiple timescales, and to determine whether the day-to-day variability patterns observed at baseline persist over months and years. Participants who completed the WeF baseline protocol will be invited to attend periodic follow-up visits for low-frequency biospecimen collection and to repeat the original 15-day high-frequency sampling protocol at planned intervals, beginning approximately six months after the WeF baseline and continuing at extended intervals thereafter. By combining sparse routine sampling with recurring high-density sampling windows, the study aims to distinguish the stable core microbiome from transient and seasonal fluctuations, to track gradual community shifts under free-living condit

Published 2026-05-28 · Last kit-update 2026-05-28